IB Biology SL Topic 2 — Carbohydrates & Lipids Paper 1 & 2 Core idea ~8 min read

Properties of Carbon

Every single molecule in your body that does anything interesting is built around carbon. Not because carbon is rare or special-looking, but because of one plain fact: it can make four bonds at once. That one fact is where the whole of biochemistry comes from, and it is the thing examiners want you to explain.

📘 What you need to know

Why four bonds changes everything

Atoms are stable when their outer shell is full. Carbon has four electrons out of the eight it needs, which puts it in an unusual position: it is exactly halfway. It cannot easily give four electrons away, and it cannot easily take four in. So it does the only thing left — it shares. Four times over.

Sharing a pair of electrons with another atom is a covalent bond, and covalent bonds are strong. That is the second half of the story. Carbon does not just make lots of bonds; it makes lots of strong bonds, which is why a molecule of DNA or starch can be enormous and still hold together.

Why life is built on carbon four outer electrons, so four covalent bonds, every time ONE CARBON ATOM C the 4 red dots are free to bond METHANE H H H H C each line = one shared pair Carbon shares four pairs of electrons, so it sits at the centre of the molecule. The four bonds point to the corners of a tetrahedron, so real molecules are 3D, not flat.
Methane is drawn flat here to keep it simple, but the four bonds actually spread out into 3D. That shape is why two molecules with the same atoms can behave completely differently.
If a question asks why carbon is so important, do not just say “it makes four bonds” and stop. Say what the four bonds let it do — long chains, branches, rings, and stable giant molecules. That is where the marks are.

Chains, branches and rings

Because carbon can bond to other carbon atoms, you can join them end to end almost forever. That gives you a skeleton, and everything else hangs off it. Change the shape of the skeleton and you change what the molecule does.

Same atom, four different skeletons each corner and each end of a line is a carbon atom STRAIGHT CHAIN cellulose BRANCHED CHAIN glycogen SINGLE RING glucose, cytosine JOINED RINGS adenine, cholesterol The atoms are the same. Only the shape changes, and the shape decides the job. Green lines mark the branch points, which is where glycogen differs from a plain straight chain.
Chemists leave out the C and H labels on skeletons like these. Every corner is a carbon, and enough hydrogens are assumed to fill up its four bonds.

Single and double bonds

Carbon does not have to spread its four bonds between four different partners. It can use two of them on the same neighbour, which gives a double bond.

Count to four. Whatever you draw, every carbon atom must end up with exactly four lines coming out of it. A double bond counts as two. If your carbon has three or five, the structure is wrong — and that is an easy mark to lose in a drawing question.

Functional groups: the working parts

A long carbon and hydrogen skeleton is not very reactive on its own. The interesting chemistry comes from small clusters of atoms attached to it, called functional groups. Learn these four and a lot of Biology stops looking like a memory test.

The four groups that do the work the rest of the molecule is mostly just carbon and hydrogen HYDROXYL —OH sugars, glycerol loves water CARBOXYL —COOH fatty acids amino acids AMINO —NH₂ amino acids proteins PHOSPHATE —PO₄ phospholipids DNA, RNA, ATP Spot the functional group and you can usually name the molecule family. A molecule with both an amino group and a carboxyl group is an amino acid, every time.
These groups keep coming back all year. Hydroxyl groups join sugars together, carboxyl groups join to glycerol in fats, and phosphate groups build the backbone of DNA.
GroupWritten asWhere you meet it
Hydroxyl—OHGlucose, glycerol; makes molecules soluble in water
Carboxyl—COOHFatty acids and amino acids; slightly acidic
Amino—NH2Amino acids, so every protein you own
Phosphate—PO4Phospholipids, DNA, RNA and ATP; carries a negative charge

🤔 Why does this matter for the rest of the topic?

Almost every reaction you will learn in this topic is two functional groups meeting and joining up. Two hydroxyl groups make a glycosidic bond in a sugar. A carboxyl group and a hydroxyl group make an ester bond in a fat. An amino group and a carboxyl group make a peptide bond in a protein. Same idea three times over.

A quick word on units

Biological molecules are small and their measurements come with SI prefixes. Scientists worldwide agreed these so that a result from a lab in Lahore means exactly the same thing in Lisbon.

Prefixes worth knowing kilo = 103  •  centi = 10−2  •  milli = 10−3  •  micro = 10−6  •  nano = 10−9
Scale check. A cell is measured in micrometres, a membrane in nanometres. A phospholipid bilayer is about 7–10 nm thick, which is roughly a ten-thousandth of the width of a hair.

Worked examples

WORKED EXAMPLE

Explain why carbon can form such a large variety of molecules. [3]

Point 1 Carbon has 4 electrons in its outer shell, so it forms 4 covalent bonds. Point 2 It can bond to other carbon atoms, so it builds long chains, branched chains and rings. Point 3 It can also form double bonds and bond to H, O, N and S, giving many different shapes and functional groups. 3 marks: four bonds + joins to itself + variety of shapes One mark per separate idea. Do not write the same idea three ways.
WORKED EXAMPLE

A carbon atom in the middle of a hydrocarbon chain is bonded to two neighbouring carbons by single bonds. How many hydrogen atoms are attached to it? [1]

Step 1: total bonds available Every carbon makes 4 bonds. No exceptions. Step 2: subtract the bonds already used 4 − 2 = 2 bonds left over. 2 hydrogen atoms This is exactly how you check a fatty acid is saturated.
WORKED EXAMPLE

A molecule contains both an amino group and a carboxyl group. Identify the type of molecule and the polymer it forms. [2]

Step 1: read the functional groups —NH₂ is the amino group and —COOH is the carboxyl group. Step 2: match them to a family Only one monomer carries both. An amino acid, which joins up to form a polypeptide (protein) Functional groups are the fingerprint of the molecule family.

💡 Exam tip

⚠ Common mix-up

Up next: Macromolecules — how these small carbon molecules get joined into giant ones, and how your gut takes them apart again.

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