IB Biology SL Topic 3 — Enzymes & Metabolism Paper 1 & 2 Core idea ~9 min read

Activation Energy (Skills)

Even a reaction that gives out energy needs a shove to get going. That shove is the activation energy — and lowering it is the single thing every enzyme does.

📚 What you need to know

What activation energy is

Think about a match. A match burning gives out plenty of energy — but it does not light itself while it is sitting in the box. You have to strike it first. That initial input is the activation energy: the energy needed to get the reaction started, even when the reaction itself will release energy overall.

At the molecular level, the reason is that bonds have to be broken before new ones can form. The substrate must be pushed into an unstable, high-energy arrangement before it can rearrange into products.

Definition activation energy = the energy needed to make the substrate unstable enough for the reaction to proceed

In a beaker you supply that energy with heat. A cell cannot, so it uses enzymes instead. That is the whole point of this section.

How an enzyme lowers the hump

When the substrate binds to the active site, the induced fit pulls it slightly out of shape. Its bonds are strained, which makes them less stable and easier to break. Holding the substrate in the correct orientation helps too — nothing has to be pushed into position by chance.

The result is that the substrate needs far less energy to reach the unstable state. The hump on the energy profile becomes smaller.

The enzyme lowers the hump, not the finish line same substrate level, same product level, smaller barrier without enzyme with enzymesubstrate products without enzyme: tall barrier with enzyme: much lower barrierprogress of reaction energyBoth curves start and finish at exactly the same height. The enzyme changes how hard the reaction is, not how much energy it gives out.
Measure activation energy from the substrate level up to the peak — not from the bottom of the axis, and not from the product level.
Why a smaller hump means a faster reaction: molecules have a range of energies. Lower the barrier and a much larger fraction of collisions now have enough energy to get over it, so far more of them are successful.
Watch what the enzyme does not change. It does not make the products more stable, it does not release extra energy, and it does not change whether the reaction is exergonic or endergonic. It only shortens the climb.

The equation you should be able to write

The whole of enzyme action can be squeezed into one line of shorthand.

E + S gives ES gives E + P the enzyme comes out of the equation exactly as it went in E S ES E P+ + enzyme substrate enzyme–substrate complex enzyme productsubstrate is in a transitional state here free to be reusedE appears on both sides, which is what makes it a catalyst. Only S has changed into P by the end of the line.
If you can write this line and say what each letter means, you can answer most short questions on enzyme action.

Two pairs of words that get confused

This is the trap in this section, and it is easy to avoid once you see the pattern. One pair is about all the energy; the other is about heat only.

WordWhat it measuresDirection
ExergonicNet energy overallEnergy is released
EndergonicNet energy overallEnergy is taken in
ExothermicThermal energy onlyHeat is released
EndothermicThermal energy onlyHeat is taken in
A memory hook: the -ergonic words share a root with energy, and the -thermic words share a root with thermometer. Energy in general, or heat in particular.

Linking back to the first page of this topic: catabolic reactions are exergonic and anabolic reactions are endergonic. Both still need enzymes, and both still have an activation energy that has to be got over.

Worked examples

WORKED EXAMPLE

Using an energy profile, explain how an enzyme increases the rate of a reaction. [3]

Step 1: name what changes on the graph The enzyme lowers the activation energy, so the hump is smaller. Step 2: say why that speeds things up More substrate molecules now have enough energy to react, so more collisions are successful. Step 3: say what does not change The substrate and product energy levels are the same, so the energy released is unchanged. Lower activation energy, more successful collisions, same overall energy change the third point is the one students leave out — and it is often the third mark
WORKED EXAMPLE

On an energy profile, the substrate sits at 250 kJ, the peak without an enzyme is at 410 kJ, the peak with an enzyme is at 320 kJ, and the products sit at 180 kJ. Find both activation energies and the energy released.

Step 1: activation energy = peak − substrate without enzyme: 410 − 250 = 160 kJ with enzyme: 320 − 250 = 70 kJ Step 2: how much the enzyme saved 160 − 70 = 90 kJ lower Step 3: energy released = substrate − products 250 − 180 = 70 kJ, and the enzyme does not affect this Eₐ = 160 kJ and 70 kJ; 70 kJ released either way measure the hump from the substrate line, never from zero
WORKED EXAMPLE

A student writes: “the enzyme speeds up the reaction because it gives the substrate extra energy.” Explain why this is wrong. [2]

Step 1: what the enzyme actually does It binds the substrate and strains its bonds, which lowers the activation energy. Step 2: correct the misunderstanding No energy is added. The barrier is lowered so the energy already present is enough. The enzyme lowers the energy needed; it does not supply energy an enzyme is a catalyst, not a battery

💡 Exam tip

⚠ Common mix-up

That completes Enzymes & Metabolism. Up next: Adenosine Triphosphate (ATP) — the molecule that carries the energy those catabolic reactions release, and spends it on the anabolic ones.

Want this explained one-to-one?

Book a free session with an experienced IB Biology tutor and get your trickiest topics made simple.

Book a Free Session →