IB Biology HL Cell Structure & Microscopy Paper 1 & 2 ~11 min read

Endosymbiotic Theory

There is a mitochondrion in almost every cell in your body, and it has its own DNA. Not yours — its own, circular, bacterial-looking DNA. The reason is that mitochondria were once free-living bacteria that got swallowed and never left.

📚 What you need to know

What is supposed to have happened

Follow it as a sequence. Each step is small and sensible on its own, which is what makes the whole idea believable.

How a bacterium became an organelle Each step is ordinary. Put them in order and you get the first eukaryotic cell. large cell engulfs it kept inside becomes an organelleanaerobic prokaryote takes in an aerobic one not digested, so it lives this is a mitochondrionThe engulfing membrane is why there are two membranes The inner one belonged to the bacterium; the outer one came from the host cell.
That last point is the neatest part of the theory. The double membrane is not a design feature — it is a leftover from the moment of swallowing.
  1. A large anaerobic prokaryote takes in a smaller aerobic prokaryote by engulfing it, wrapping it in a piece of its own membrane.
  2. The smaller cell is not digested. It carries on respiring aerobically inside the host.
  3. Both gain. The host gets far more ATP from aerobic respiration; the smaller cell gets a steady supply of nutrients and shelter. A relationship where both benefit is mutualism, and living inside the other organism makes it endosymbiosis.
  4. Over many generations the engulfed cell loses the genes it no longer needs and becomes dependent on the host. It is now a mitochondrion.
  5. Later, one of these cells engulfs a photosynthetic prokaryote in the same way. That becomes the chloroplast, which is why only some eukaryotes have them.
Why the order matters. Every eukaryote has mitochondria, but only plants and algae have chloroplasts. That fits the sequence exactly: the mitochondrion came first, into an ancestor shared by everything, and the chloroplast came later into just one branch. The pattern in living organisms today matches the order of events.

The evidence

The theory would be a nice story with nothing behind it if mitochondria and chloroplasts did not still look so much like bacteria. They do, in five specific ways.

Five bacterial features still visible today Each of these is exactly what you would expect if the organelle used to be a cell. double membrane own circular naked DNA 70S ribosomes divides by binary fission bacterium-sizedA chloroplast shows the same five features Which is why the same argument is used for both organelles.
The purple loop is the organelle’s own DNA and the brown dots are its 70S ribosomes. Both are prokaryotic features sitting inside a eukaryotic cell.
EvidenceWhat is observedWhy it supports the theory
Double membraneTwo membranes, and the inner one resembles a prokaryotic membraneThe inner was the bacterium’s own; the outer came from the host engulfing it
Own DNAA circle of naked DNA, separate from the nuclear DNACircular naked DNA is the prokaryotic pattern
70S ribosomesRibosomes inside are 70S, not the 80S found in the cytoplasm70S is the prokaryotic size, so the organelle makes some of its own proteins
Binary fissionThey divide in two on their own, independently of the cellThis is how prokaryotes reproduce
SizeRoughly 1 to 5 µm, the same range as bacteriaConsistent with an origin as a free-living prokaryote
🧠

Two, seventy, split

Two membranes, 70S ribosomes, and it splits by binary fission — plus its own circular DNA and a bacterial size. Five points, and most questions here are worth three or four.

A common exam trap is to ask why an organelle contains 70S ribosomes when the rest of the cell has 80S ones. Do not treat it as an oddity to explain away. It is direct evidence: the organelle kept the ribosomes it had when it was a bacterium.

Worked examples

WE 1

Outline the theory

Outline the endosymbiotic theory for the origin of mitochondria. (3 marks)

Point 1: the engulfing A large anaerobic prokaryote engulfed a smaller aerobic prokaryote. Point 2: it survived The engulfed cell was not digested and continued to respire aerobically inside the host. Point 3: both benefited The host gained ATP and the engulfed cell gained shelter and nutrients, so the relationship persisted and it became a mitochondrion. Engulfed, not digested, and both gained — so it stayed the “not digested” step is often missed, and it is usually a mark
WE 2

Use the evidence

State three pieces of evidence that support the endosymbiotic origin of chloroplasts. (3 marks)

Evidence 1 They contain their own circular naked DNA, like a prokaryote. Evidence 2 They have 70S ribosomes, the prokaryotic size, rather than the 80S ribosomes of the cytoplasm. Evidence 3 They are surrounded by a double membrane and divide by binary fission, independently of the cell. Circular DNA, 70S ribosomes, double membrane and binary fission say why each point matters, not just what it is, if the question says “explain”
WE 3

Explain a pattern in living organisms

All eukaryotes have mitochondria but only some have chloroplasts. Suggest how endosymbiotic theory explains this. (3 marks)

Point 1: the order of events The aerobic prokaryote was engulfed first, in an ancestor of all eukaryotes. Point 2: the second event A photosynthetic prokaryote was engulfed later, by only one group of those cells. Point 3: the consequence Only the descendants of that group inherited chloroplasts, which is why plants and algae have them and animals do not. Mitochondria came first and spread to all; chloroplasts came later to one branch this is a “suggest” question, so build the argument rather than reciting evidence

💡 Exam tips

⚠ Common mistakes

Up next: Cell Differentiation — how cells with identical DNA end up doing completely different jobs.

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