IB Biology HL Nerves & Signalling Paper 1 & 2 ~12 min read

Synapses

Neurones never actually touch. There is always a tiny gap, and an electrical impulse cannot jump it. So the signal changes form — from electrical to chemical and back again — millions of times a day inside your head.

📚 What you need to know

What a synapse is

Where two neurones meet, they do not come into physical contact. A very small gap called the synaptic cleft sits between them. The end of the first neurone, the cleft, and the start of the second neurone together make up the synapse.

Synapses are not just between neurones. They act as the junctions between any cells in the nervous system:

The membrane on the neurone before the gap is the presynaptic membrane. The one after the gap is the postsynaptic membrane. Get those two words the right way round and half the topic becomes easier.

The structure of a synapse impulse arrives vesicles holding neurotransmitter presynaptic membrane synaptic cleft receptor proteins postsynaptic membrane The receptor shape is why only the right chemical works here
The receptor proteins are the reason a synapse is selective. Only a molecule with a complementary shape fits, so the wrong chemical arriving in the cleft does nothing.

How the message gets across

Acetylcholine is made in the presynaptic neurone by joining choline to an acetyl group. It is stored in vesicles until it is needed. Here is the whole sequence.

Synaptic transmission, step by step 1 Action potential arrives at the end of the axon and depolarises the membrane 2 Calcium ion channels open, so calcium ions diffuse into the presynaptic knob 3 Calcium makes vesicles move to and fuse with the presynaptic membrane 4 Acetylcholine is released into the synaptic cleft 5 Acetylcholine diffuses across the cleft to the postsynaptic membrane 6 Acetylcholine binds to receptor proteins on the postsynaptic membrane 7 Sodium ion channels open and sodium ions diffuse into the postsynaptic cell 8 The membrane depolarises; if threshold is reached an action potential starts 9 Acetylcholinesterase breaks the acetylcholine into acetate and choline 10 Both are reabsorbed into the presynaptic neurone and recycled back into ACh
Read down the green column first, then down the orange one. Steps 9 and 10 are the ones students leave out, and they are usually worth a mark each.

Why the neurotransmitter has to be destroyed

If acetylcholine stayed stuck to the receptors, the sodium ion channels would stay open and the postsynaptic membrane would stay permanently depolarised. The neurone could never reset, so it could never fire again.

So the enzyme acetylcholinesterase catalyses the hydrolysis of ACh into acetate and choline. These products are absorbed back into the presynaptic neurone, where ACh is rebuilt. Nothing is wasted, and the synapse is ready for the next impulse.

This is a lovely place for a "suggest" question. Anything that blocks acetylcholinesterase leaves ACh sitting on the receptors, so the muscle stays contracted. That is exactly how some nerve agents and insecticides work.

One way only

Synapses make sure impulses can travel in one direction only. The reason is beautifully simple:

This stops impulses wandering back the way they came and keeps signals travelling along proper pathways.

Two reasons, not one. Impulses travel one way for two separate reasons, and exams sometimes ask for both. Along an axon it is the refractory period. At a synapse it is the one-sided arrangement of vesicles and receptors.

Worked examples

WE 1

Describe transmission across a cholinergic synapse

Describe how an impulse is transmitted across a cholinergic synapse. (5 marks)

Point 1: the trigger The action potential depolarises the presynaptic membrane, so calcium ion channels open and calcium ions diffuse in. Point 2: release Calcium causes vesicles to fuse with the presynaptic membrane, releasing acetylcholine into the synaptic cleft. Point 3: crossing ACh diffuses across the cleft and binds to complementary receptor proteins on the postsynaptic membrane. Point 4: the new impulse Sodium ion channels open, Na⁺ diffuses in, and if enough binds the membrane reaches threshold and a new action potential is generated. Point 5: the reset Acetylcholinesterase hydrolyses the ACh into acetate and choline, which are reabsorbed and recycled. Calcium in, vesicles fuse, ACh across, sodium in, enzyme clears up describe questions want the steps in order. Numbering them in your answer costs nothing and keeps you from skipping one
WE 2

Suggest the effect of blocking an enzyme

A drug binds to acetylcholinesterase and stops it working. Suggest the effect on a synapse between a motor neurone and a muscle fibre. (3 marks)

Step 1: what the enzyme normally does It hydrolyses ACh in the cleft, clearing it off the receptors. Step 2: what happens without it ACh is not broken down, so it stays bound to the receptors on the postsynaptic membrane. Step 3: the consequence Sodium ion channels stay open, so the membrane stays depolarised and action potentials keep being generated in the muscle fibre. Continuous stimulation — the muscle stays contracted and cannot relax for "suggest" questions, follow the chain right through to an effect you can actually see, such as paralysis

💡 Exam tips

⚠ Common mistakes

Up next: Action Potentials — a proper look at the spike itself, and why it is all-or-nothing.

Want this explained one-to-one?

Book a free session with an experienced IB Biology tutor and get your trickiest topics made simple.

Book a Free Session →